PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT21053
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family NAC
Protein Properties Length: 504aa    MW: 56423.9 Da    PI: 4.5471
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT21053genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM85.97.5e-271432711128
       NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.....sgyWkatgkdkevlskk 96 
               lp+G++F+P+d+el+ + L+k+ ++ + +   +i+e+  +  e        k++ +  +fF+++ k+y+tg+rk+r+++     + +W++tgk+k+v++ +
  EMT21053 143 LPKGVKFDPSDQELLGHLLAKHDRAGSQPH-PFIDEFIPTVEEADGV----KQDGSVSHFFHRTFKAYNTGTRKRRKINtsdlaDVRWHKTGKTKPVMV-D 237
               799************888887766666555.5677765544444444....4567788******************75444555889************.9 PP

       NAM  97 gelvglkktLvfy..kgrapkgektdWvmheyrl 128
               g++ g+kk++v+y  + +  k++kt+Wvmh+y+l
  EMT21053 238 GQHLGCKKIMVLYmsTVKGGKPKKTNWVMHQYHL 271
               99***********6644666777*********98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.27E-32128290IPR003441NAC domain
PROSITE profilePS5100526.78143290IPR003441NAC domain
PfamPF023651.4E-14144271IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000077Biological ProcessDNA damage checkpoint
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010332Biological Processresponse to gamma radiation
GO:0040020Biological Processregulation of meiotic nuclear division
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 504 aa     Download sequence    Send to blast
MTGHDWFGCC GVDGWIASVL CSFAVKLAIA RQKDDVFALV MVERDIFFLY RVSSMYALCS  60
IAIKELTLCS IAIQPLVLPF CGYNAVDRTS WLIDSQRIAS KIKNVSGSRD LSKQKWLSNP  120
TKECPNCSHS IDNSDVVHQW PGLPKGVKFD PSDQELLGHL LAKHDRAGSQ PHPFIDEFIP  180
TVEEADGVKQ DGSVSHFFHR TFKAYNTGTR KRRKINTSDL ADVRWHKTGK TKPVMVDGQH  240
LGCKKIMVLY MSTVKGGKPK KTNWVMHQYH LGTGEDEQNG EYVVSKLFFQ QQNGQKSALE  300
LTNTDVMETT VAEADLTDLP EPTAEEEDER ISSISNQEFL LNNEYNADEE ALHSHEHNTY  360
QENGDCEIKM EEKAADENAV YPSSEKPEDG DNPPSQDPNL WEGDSQFLLD SQQLAENLAI  420
CDEFLQSQTS CGDGDEPGSI KPRLAVYAQL PVEDLKKDLQ EYKDLGPSDN ANLEPENNAE  480
LRLSQLEFSQ DSYTIGIFTG QAAD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKP7291471e-109KP729147.1 Stipa purpurea microsatellite ZH4 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004965197.10.0PREDICTED: NAC domain-containing protein 8-like
SwissprotQ6NQK21e-112NAC8_ARATH; NAC domain-containing protein 8
TrEMBLM8BH250.0M8BH25_AEGTA; NAC domain-containing protein 8
STRINGORGLA06G0096700.10.0(Oryza glaberrima)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP67853651
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25580.11e-110NAC family protein